MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Muribacter muris
19428wC3_WT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 94
bases: 2,526,693 bps
CDS: 2,443
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 49
misc RNA:
Total features: 2,502
Total number of protein coding genes annotated/found:
2,443
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5037|JADGLC010000009.1
SEQF5037_02502
Genome Viewer
NA
AA
1425/475
87244-85820
TPR repeat-containing protein
SEQF5037|JADGLC010000009.1
SEQF5037_02501
Genome Viewer
NA
AA
2205/735
85628-83424
GTP pyrophosphokinase
SEQF5037|JADGLC010000009.1
SEQF5037_02500
Genome Viewer
NA
AA
1191/397
83412-82222
1-deoxy-D-xylulose 5-phosphate reductoisomerase
SEQF5037|JADGLC010000009.1
SEQF5037_02499
Genome Viewer
NA
AA
456/152
81577-82032
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02498
Genome Viewer
NA
AA
321/107
81257-81577
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02497
Genome Viewer
NA
AA
597/199
80651-81247
dITP/XTP pyrophosphatase
SEQF5037|JADGLC010000009.1
SEQF5037_02496
Genome Viewer
NA
AA
954/318
79668-80621
Lipid A biosynthesis lauroyltransferase
SEQF5037|JADGLC010000009.1
SEQF5037_02495
Genome Viewer
NA
AA
324/108
79505-79182
Ribosome-associated factor Y
SEQF5037|JADGLC010000009.1
SEQF5037_02494
Genome Viewer
NA
AA
1143/381
77547-78689
Aldo-keto reductase IolS
SEQF5037|JADGLC010000009.1
SEQF5037_02493
Genome Viewer
NA
AA
246/82
77298-77543
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02492
Genome Viewer
NA
AA
606/202
76616-77221
putative protein YcjY
SEQF5037|JADGLC010000009.1
SEQF5037_02491
Genome Viewer
NA
AA
639/213
76591-75953
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02490
Genome Viewer
NA
AA
153/51
75810-75962
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02489
Genome Viewer
NA
AA
456/152
75773-75318
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02488
Genome Viewer
NA
AA
1548/516
75306-73759
Multicopper oxidase mco
SEQF5037|JADGLC010000009.1
SEQF5037_02487
Genome Viewer
NA
AA
828/276
72612-73439
IS3 family transposase ISApl3
SEQF5037|JADGLC010000009.1
SEQF5037_02486
Genome Viewer
NA
AA
501/167
72106-72606
IS3 family transposase ISApl3
SEQF5037|JADGLC010000009.1
SEQF5037_02485
Genome Viewer
NA
AA
267/89
71786-72052
Quinone oxidoreductase 1
SEQF5037|JADGLC010000009.1
SEQF5037_02484
Genome Viewer
NA
AA
303/101
71614-71312
hypothetical protein
SEQF5037|JADGLC010000009.1
SEQF5037_02483
Genome Viewer
NA
AA
405/135
71247-70843
Arsenate reductase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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